Anwendungshinweise

Trace-Level Semivolatiles Analysis: An Evaluation of the RMX-5Sil MS Column

Published in Collaboration with Shimadzu Corporation

21 Nov 2025

rowboat moored at pier

Key Highlights

  • Highly effective GC column deactivation produces an exceptionally inert sample flow path.
  • Maximum inertness results in sharp, symmetrical peaks and single or sub-picogram instrument detection limits (IDL) for a wide range of challenging semivolatiles.
  • Data quality objectives for calibration were easily met with ≤20% relative standard error (RSE) for all semivolatiles and lowest calibration points of 1-10 ppb for all compounds, except benzoic acid (50 ppb).
helpful woman on phone

Abstract

This application note evaluates the performance of an RMX-5Sil MS column for trace-level GC-MS/MS analysis of semivolatile organic compounds. Single or sub-picogram instrument detection limits were achieved for all compounds, except benzoic acid (14.70 pg) and 2,4-dinitrophenol (11.53 pg). Calibration curve %RSE was ≤20% for all compounds, and curves ranged from 1-1000 ppb to 10-1000 ppb for all compounds, except benzoic acid, which was 50-1000 ppb.

Introduction

Environmental testing laboratories routinely analyze semivolatile organic compounds (SVOCs) by GC-MS or GC-MS/MS using methods such as EPA Method 8270E. Labs are increasingly adopting GC-MS/MS methods because the improved selectivity of the detector allows for more sensitive analyses, such as those needed for EPA Method 3511 microextraction, which saves time and reduces solvent consumption compared to traditional sample preparation methods that can use up to a liter of sample. To achieve the full benefits of MS/MS sensitivity, the analytical column must be highly inert to maximize peak signal-to-noise ratios. A broadly effective column deactivation is essential for ensuring good overall method performance across a wide range of compound chemistries that interact via different mechanisms with any active sites present on the column surface. In this study, an RMX-5Sil MS column was independently evaluated for analytical performance across a wide range of trace-level semivolatiles, including compounds that are known to be very challenging. Chromatographic performance and calibration ranges were assessed to evaluate the column’s suitability for achieving picogram-level detection.

Experimental

Standard Preparation

Multicomponent calibration standards were prepared in methylene chloride across a range of 1-1000 ppb (11 points) from commercially available reference standards.

Instrument Conditions

Samples were run on an RMX-5Sil MS column in a 30 m, 0.25 mm ID, 0.25 μm format (cat.# 17323). A Shimadzu Nexis GC-2030 GC paired with a Shimadzu GCMS-TQ8050 NX ultra-fast mass spectrometer with EI source and UFsweeper high-efficiency collision cell was used for GC-MS/MS semivolatiles analysis under the conditions listed below.

Table I: GC-MS/MS Method Conditions for Trace-Level Semivolatiles Analysis

Gas Chromatograph Shimadzu Nexis GC-2030
Column RMX-5Sil MS, 30 m x 0.25 mm ID x 0.25 µm (cat.# 17323)
Flow mode Constant linear velocity (39.5 cm/s)
Injector mode Split (5:1)
Injector liner Topaz 3.5 mm ID single taper inlet liner w/wool (cat.# 23336)
Injection volume 1 µL
Injector temperature 275 °C
Oven program 40 °C (hold 1.5 min) to 280 °C at 20 °C /min to 320 °C at 5 °C /min (hold 1 min)
MS system Shimadzu GCMS-TQ8050 NX ultra-fast mass spectrometer with EI source and UFsweeper high-efficiency collision cell
Ionization Electron impact
Ionization energy 70 eV
Emission current 60 mA
Acquisition mode MRM
Collision gas Argon
Source temperature 230 °C
GC interface temperature 300 °C

Results and Discussion

Chromatographic Performance

Overall, the RMX-5Sil MS column produced excellent peak shapes and separations for 86 semivolatiles at 50 ppb across the chromatographic space with the last compound eluting in just under 21 minutes (Figure 1). To evaluate column inertness, peak tailing was measured at or near the low and high ends of the linear calibration range for acidic and basic compounds that are known to be particularly problematic. As shown in Figure 2, the inert surface minimized surface activity at low levels and maximized peak symmetry for easy, accurate integration, even when difficult compounds were being integrated at low concentrations. In addition, the surface did not show any negative effects on polymer selectivity, as demonstrated by good separation of the closely eluting polycyclic aromatic hydrocarbon (PAH) pair, benzo(b)fluoranthene and benzo(k)fluoranthene at 1 ppb.

Figure 1: GC-MS/MS Analysis of 86 Semivolatiles on an RMX-5Sil MS Column (50 ppb, TIC)

EPA 8270E Semivolatiles on RMX-5Sil MS by GC-MS/MS (Shimadzu Chromatogram)

GC_EV1534

Peaks

PeakstR (min)Transition 1Collision energy 1Transition 2Collision energy 2
1.N-Nitrosodimethylamine3.17374.00>44.10674.00>42.1018
2.Pyridine3.27679.10>50.102179.10>52.1015
3.2-Fluorophenol4.532112.00>64.1018112.00>92.109
4.Phenol5.51494.00>66.00966.00>40.0012
5.Phenol-d5 Surr5.599.00>71.101299.00>69.1027
6.Aniline5.55493.00>66.101893.00>51.1030
7.Bis(2-chloroethyl) ether5.61993.00>63.10995.00>65.006
8.2-Chlorophenol5.688128.00>64.0018128.00>91.9015
9.1,3-Dichlorobenzene5.863146.00>111.1021146.00>75.2030
10.1,4-Dichlorobenzene5.944146.00>111.1021146.00>75.2030
11.Benzyl alcohol6.06979.00>77.1012107.00>79.109
12.1,2-Dichlorobenzene6.116146.00>111.1021146.00>75.2030
13.2-Methylphenol6.194108.00>77.0027108.00>79.0018
14.2,2′-oxybis(1-chloropropane)6.229121.05>77.009121.05>45.006
15.3 and 4-Methylphenol6.369107.10>77.1015107.10>79.106
16.N-Nitrosodi-N-propylamine6.374130.10>113.104130.10>88.104
17.Hexachloroethane6.511117.00>81.9030119.00>83.8033
18.Nitrobenzene6.56377.05>51.0021123.05>77.0015
19.Nitrobenzene-d56.54182.00>54.1018128.00>82.1018
20.Isophorone6.84682.00>54.009138.00>82.0018
21.2-Nitrophenol6.941139.00>109.109139.00>81.0012
22.2,4-Dimethylphenol6.99107.00>77.1018122.00>107.1018
23.Benzoic Acid7.019122.10>105.109105.10>77.1015
24.Bis(2-chloroethoxy)methane7.10293.00>63.10995.00>65.006
25.2,4-Dichlorophenol7.223162.00>63.1033164.00>63.1030
26.1,2,4-Trichlorobenzene7.333180.00>109.0030180.00>145.1018
27.Naphthalene7.424128.10>102.1020128.10>78.0020
28.2,6-Dichlorophenol7.223136.00>108.1027136.00>134.1027
29.4-Chloroaniline7.484127.00>65.1027127.00>92.1018
30.Hexachlorobutadiene7.59225.00>189.8021225.00>155.0030
31.4-Chloro-3-methylphenol8.072107.00>77.1018142.00>107.0018
32.2-Methylnaphthalene8.268142.10>115.1028115.10>89.0016
33.1-Methylnaphthalene8.388142.10>115.1028115.10>89.0016
34.Hexachlorocyclopentadiene8.474237.00>141.0027237.00>143.0027
35.2,4,6-Trichlorophenol8.613196.00>97.0033198.00>97.0030
36.2,4,5-Trichlorophenol8.651196.00>97.0033198.00>97.0030
37.2-Fluorobiphenyl8.721172.00>151.2027172.00>146.1027
38.2-Chloronaphthalene8.862162.00>127.1018162.00>77.1033
39.2-Nitroaniline8.979138.00>92.0015138.00>65.1033
40.1,4-Dinitrobenzene9.143168.00>75.1030168.00>92.0015
41.Dimethylphthalate9.216163.00>77.2015163.00>133.1015
42.1,3-Dinitrobenzene9.14168.00>75.0030168.00>122.0012
43.2,6-Dinitrotoluene9.281165.00>90.0015165.00>63.1033
44.Acenapthylene9.374152.10>150.1028152.10>126.1028
45.3-Nitroaniline9.48492.05>65.0012138.05>65.0027
46.Acenaphthene9.592152.10>150.1028152.10>126.1028
47.2,4-Dinitrophenol9.617184.05>107.0012154.05>107.006
48.4-Nitrophenol9.689109.05>81.0012109.05>53.1018
49.2,4-Dinitrotoluene9.77889.05>63.1018165.05>119.006
50.Dibenzofuran9.805168.00>139.1024139.00>89.1021
51.2,3,5,6-Tetrachlorophenol9.904230.00>130.9036232.00>132.9036
52.2,3,4,6-Tetrachlorophenol9.958230.00>130.9036232.00>132.9036
53.Diethylphthalate10.093149.00>65.0030177.00>149.1012
54.4-Chlorophenyl phenyl ether10.234141.00>115.2021204.00>141.2021
55.Fluorene10.23165.10>163.1028165.10>115.1028
56.4-Nitroaniline10.234138.00>108.1012108.00>80.0012
57.4,6-Dinitro-2-methylphenol10.283198.05>121.0012198.05>53.0027
58.N-Nitrosodiphenylamine (Diphenylamine)10.376169.00>167.2027168.00>139.0039
59.Diphenylhydrazine10.42977.00>51.201577.00>74.1033
60.2,4,6-Tribromophenol10.524329.80>141.0036331.80>142.9036
61.4-Bromophenyl phenyl ether10.839250.00>141.1021248.00>141.1018
62.Hexachlorobenzene10.922283.80>248.8024283.80>213.8028
63.Pentachlorophenol11.159265.90>164.9026265.90>166.9026
64.Phenanthrene11.421178.10>176.1028178.10>152.1020
65.Anthracene11.484178.10>176.1028178.10>152.1020
66.Carbazole11.68167.00>139.2027166.00>140.0018
67.Di-n-butylphthalate12.131149.00>93.1018149.00>65.1024
68.Fluoranthene12.9202.10>200.1030200.10>198.1030
69.Benzidine13.062184.00>156.1024184.00>167.1024
70.Pyrene13.18202.10>200.1030200.10>198.1030
71.o-Terphenyl-D1413.377244.00>240.1030244.00>226.2018
72.Butylbenzylphthalate14.012149.00>65.1024149.00>93.1018
73.Bis(2-ethylhexyl)adipate14.129129.00>55.1021129.00>101.109
74.3’3-Dichlorobenzidine14.769212.00>180.1024212.00>196.2021
75.Benz[a]anthracene14.805228.10>226.1032226.10>224.1032
76.Bis(2-ethylhexyl)phthalate14.875149.00>65.1024167.00>149.1015
77.Chrysene14.861228.10>226.1032226.10>224.1032
78.Di-n-octylphthalate16149.00>65.1024149.00>93.2018
79.Benzo[b]fluoranthene16.691252.10>250.1036250.10>248.1036
80.Benzo[k]fluoranthene16.746252.10>250.1036250.10>248.1036
81.Benzo[a]pyrene17.338252.10>250.1036250.10>248.1036
82.Dibenz[a,j]acridine19.26279.00>277.1033279.00>250.0045
83.Indeno[1,2,3-cd]pyrene19.754276.10>274.1036274.10>272.1036
84.Dibenz[a,h]anthracene19.813278.10>276.1036278.10>274.1060
85.Benzo[g,h,i]perylene20.339276.10>274.1036274.10>272.1036

Conditions

ColumnRMX-5Sil MS, 30 m, 0.25 mm ID, 0.25 µm (cat.# 17323)
Injection
Inj. Vol.:1 µL split (split ratio 5:1)
Liner:Topaz 3.5 mm ID single taper inlet liner w/wool (cat.# 23336)
Inj. Temp.:275 °C
Oven
Oven Temp.:40 °C (hold 1.5 min) to 280 °C at 20 °C/min to 320 °C at 5 °C/min (hold 1 min)
Carrier GasHe, constant flow
Linear Velocity:39.5 cm/sec @ 40 °C
DetectorSRM/MRM
Acquisition Type:SRM/MRM
Source Temp.:230 °C
Transfer Line Temp.:300 °C
Analyzer Type:Triple Quadrupole
Ionization Mode:EI
Collision Gas:Ar
Tune Type:PFTBA
Tune Emission Current:60 μA
NotesShimadzu Nexis GC-2030 with Shimadzu GCMS-TQ8050 NX ultra-fast mass spectrometer with EI source and UFsweeper high-efficiency collision cell
AcknowledgementShimadzu

Figure 2: The highly effective deactivation used in RMX-5Sil MS columns creates an exceptionally inert surface that produces symmetrical peaks for a wide range of semivolatiles, including acidic compounds (pentachlorophenol); basic compounds (benzidine); and closely eluting PAHs.

Select EPA 8270E Semivolatiles on RMX-5Sil MS by GC-MS/MS (Shimazu Chromatogram)

GC_EV1535

Peaks

PeakstR (min)Transition 1Collision energy 1Transition 2Collision energy 2
1.Benzidine13.062184.00>156.1024184.00>167.1024
2.Benzo[b]fluoranthene16.691252.10>250.1036250.10>248.1036
3.Benzo[k]fluoranthene16.746252.10>250.1036250.10>248.1036
4.Pentachlorophenol11.159265.90>164.9026265.90>166.9026

Conditions

ColumnRMX-5Sil MS, 30 m, 0.25 mm ID, 0.25 µm (cat.# 17323)
Injection
Inj. Vol.:1 µL split (split ratio 5:1)
Liner:Topaz 3.5 mm ID single taper inlet liner w/wool (cat.# 23336)
Inj. Temp.:275 °C
Oven
Oven Temp.:40 °C (hold 1.5 min) to 280 °C at 20 °C/min to 320 °C at 5 °C/min (hold 1 min)
Carrier GasHe, constant flow
Linear Velocity:39.5 cm/sec @ 40 °C
DetectorSRM/MRM
Acquisition Type:SRM/MRM
Source Temp.:230 °C
Transfer Line Temp.:300 °C
Analyzer Type:Triple Quadrupole
Ionization Mode:EI
Collision Gas:Ar
Tune Type:PFTBA
Tune Emission Current:60 μA
NotesShimadzu Nexis GC-2030 with Shimadzu GCMS-TQ8050 NX ultra-fast mass spectrometer with EI source and UFsweeper high-efficiency collision cell
AcknowledgementShimadzu
EZGC software ad

Calibration Performance

As demonstrated in Table II, the combination of the Shimadzu GC-MS/MS system and the highly inert RMX-5Sil MS analytical column allowed for outstanding trace-level sensitivity for a broad range of semivolatile compound classes. The calibration curve %RSE was ≤20% for all compounds, which met data quality objectives for calibration. In addition, R2 was determined for a subset of representative semivolatiles and was found to be ≥0.99 for all compounds that were assessed. For all semivolatiles, the calibration curves ranged from 1-1000 ppb to 10-1000 ppb, except benzoic acid which was 50-1000 ppb. A slightly higher linear range for benzoic acid was not surprising because it does not solubilize well in 5-type phases. Finally, very low instrument detection limits were achieved and were single or sub-picogram levels for all semivolatiles, except benzoic acid (14.70 pg) and 2,4-dinitrophenol (11.53 pg).

Table II: Calibration Performance for Trace-Level Semivolatiles Analysis on an RMX-5Sil MS Column

Compound Name Retention Time (min) Calibration Curve %RSE R2 Low Point (ppb) High Point (ppb) IDL (pg)
N-Nitrosodimethylamine 3.173 16.82 5 1000 2.14
Pyridine 3.276 8.69 0.994 10 1000 3.23
2-Fluorophenol 4.532 15.24 5 1000 0.28
Phenol 5.514 19.25 1 1000 0.70
Phenol-d5 5.5 17.86 1 1000 0.29
Aniline 5.554 9.52 0.993 10 1000 1.43
Bis(2-chloroethyl) ether 5.619 14.33 1 1000 0.42
2-Chlorophenol 5.688 19.78 1 1000 1.28
1,3-Dichlorobenzene 5.863 16.96 1 1000 0.36
1,4-Dichlorobenzene 5.944 17.90 1 1000 0.77
Benzyl alcohol 6.069 17.06 1 1000 0.98
1,2-Dichlorobenzene 6.116 17.32 1 1000 1.13
2-Methylphenol 6.194 19.48 10 1000 1.95
2,2′-oxybis(1-chloropropane) 6.229 19.32 10 1000 4.04
3- and 4-Methylphenol 6.369 19.71 1 1000 1.01
N-Nitrosodi-N-propylamine 6.374 5.38 0.997 10 1000 3.10
Hexachloroethane 6.511 15.67 5 1000 1.36
Nitrobenzene 6.563 12.10 0.996 5 1000 0.81
Nitrobenzene-d5 6.541 17.81 1 1000 0.96
Isophorone 6.846 18.92 1 1000 0.56
2-Nitrophenol 6.941 13.56 0.996 10 1000 1.26
2,4-Dimethylphenol 6.99 19.63 1 1000 0.36
Benzoic acid 7.019 3.84 0.998 50 1000 14.70
Bis(2-chloroethoxy)methane 7.102 14.01 1 1000 0.26
2,4-Dichlorophenol 7.223 18.99 1 1000 0.83
1,2,4-Trichlorobenzene 7.333 10.67 1 1000 0.46
Naphthalene 7.424 8.68 1 1000 0.73
2,6-Dichlorophenol 7.223 18.18 1 1000 0.62
4-Chloroaniline 7.484 13.85 0.998 5 1000 1.34
Hexachlorobutadiene 7.59 13.96 1 1000 0.65
4-Chloro-3-methylphenol 8.072 16.99 1 1000 0.30
2-Methylnaphthalene 8.268 10.57 1 1000 0.63
1-Methylnaphthalene 8.388 18.50 1 1000 0.64
Hexachlorocyclopentadiene 8.474 16.59 0.998 5 1000 2.72
2,4,6-Trichlorophenol 8.613 16.69 5 1000 1.55
2,4,5-Trichlorophenol 8.651 16.98 5 1000 0.76
2-Fluorobiphenyl 8.721 16.31 1 1000 1.05
2-Chloronaphthalene 8.862 14.23 1 1000 0.43
2-Nitroaniline 8.979 17.82 0.996 10 1000 1.33
1,4-Dinitrobenzene 9.143 12.76 0.996 10 1000 8.63
Dimethylphthalate 9.216 18.60 1 1000 0.60
1,3-Dinitrobenzene 9.14 18.88 0.991 10 1000 6.97
2,6-Dinitrotoluene 9.281 19.86 0.997 5 1000 2.06
Acenapthylene 9.374 11.73 1 1000 0.37
3-Nitroaniline 9.484 18.30 0.995 10 1000 2.89
Acenaphthene 9.592 9.44 0.991 1 1000 2.61
2,4-Dinitrophenol 9.617 7.79 0.995 10 1000 11.53
4-Nitrophenol 9.689 14.01 0.998 10 1000 4.39
2,4-Dinitrotoluene 9.778 14.84 0.999 10 1000 4.30
Dibenzofuran 9.805 9.94 1 1000 0.38
2,3,5,6-Tetrachlorophenol 9.904 16.86 5 1000 2.37
2,3,4,6-Tetrachlorophenol 9.958 17.72 0.997 5 1000 1.74
Diethylphthalate 10.093 15.97 1 1000 0.67
4-Chlorophenyl phenyl ether 10.234 7.21 1 1000 0.57
Fluorene 10.23 14.54 1 1000 0.37
4-Nitroaniline 10.234 18.81 0.993 10 1000 2.33
4,6-Dinitro-2-methylphenol 10.283 19.99 0.996 10 1000 7.99
N-Nitrosodiphenylamine 10.376 18.03 1 1000 0.53
Diphenylamine 10.376 18.03 1 1000 0.53
Diphenylhydrazine 10.429 14.83 10 1000 3.39
2,4,6-Tribromophenol 10.524 18.55 0.997 5 1000 4.15
4-Bromophenyl phenyl ether 10.839 15.84 1 1000 0.74
Hexachlorobenzene 10.922 12.99 1 1000 0.96
Pentachlorophenol 11.159 16.75 0.997 5 1000 1.14
Phenanthrene 11.421 13.06 1 1000 0.18
Anthracene 11.484 15.30 1 1000 0.92
Carbazole 11.68 14.68 1 1000 0.52
Di-n-butylphthalate 12.131 15.80 5 1000 0.25
Fluoranthene 12.9 10.80 1 1000 0.26
Benzidine 13.062 19.24 0.998 10 1000 1.43
Pyrene 13.18 10.13 1 1000 0.54
o-Terphenyl-D14 13.377 13.45 1 1000 0.62
Butylbenzylphthalate 14.012 15.67 5 1000 0.76
Bis(2-ethylhexyl)adipate 14.129 18.95 0.994 10 1000 1.15
3’3-Dichlorobenzidine 14.769 17.70 0.996 10 1000 1.76
Benz[a]anthracene 14.805 11.61 1 1000 0.38
Bis(2-ethylhexyl)phthalate 14.875 19.67 5 1000 0.58
Chrysene 14.861 8.91 1 1000 0.34
Di-n-octylphthalate 16 18.78 0.998 5 1000 0.49
Benzo[b]fluoranthene 16.691 11.15 1 1000 0.41
Benzo[k]fluoranthene 16.746 13.09 1 1000 0.50
Benzo[a]pyrene 17.338 12.32 1 1000 0.24
Dibenz[a,j]acridine 19.26 19.92 1 1000 0.60
Indeno[1,2,3-cd]pyrene 19.754 15.17 1 1000 0.71
Dibenz[a,h]anthracene 19.813 13.06 1 1000 0.56
Benzo[g,h,i]perylene 20.339 10.79 1 1000 0.50

Conclusion

This study confirmed the suitability of RMX-5Sil MS columns for trace-level (single digit ppb) semivolatiles analysis by GC-MS/MS. Overall, the column demonstrated inertness for a broad range of compounds chemistries (acids, bases, and neutrals) and generated excellent linear calibrations. Peak shape and symmetry were intact even at low levels where active compounds are exceptionally difficult to analyze. Nearly all compounds (98%) achieved IDLs at or below single-picogram levels; calibration ranges of 1, 5, or 10 ppb to 1000 ppb; and calibration curves with ≤20% RSE.

References

  1. U.S. Environmental Protection Agency, Method 8270E, Semivolatile organic compounds by gas chromatography/mass spectrometry, June 2018. https://www.epa.gov/sites/default/files/2020-10/documents/method_8270e_update_vi_06-2018_0.pdf
  2. U.S. Environmental Protection Agency, Method 3511 (SW-846), Organic compounds in water by microextraction, July 2014. https://www.epa.gov/hw-sw846/sw-846-test-method-3511-organic-compounds-water-microextraction

Products Mentioned


Topaz, Single Taper Inlet Liner, 3.5 mm x 5.0 x 95, für Shimadzu GCs 17A, 2010, 2014 und 2030, mit Quarzwolle am unteren Ende, Premium-Deaktivierung, 5er Pack

Authors

  • Yoshiro Hiramatsu

    Mr. Yoshiro Hiramatsu has been working for over 12 years for GC-MS engineering in Japan and the U.S. He majored in magnetic physics from Kyoto University and then joined Shimadzu. He played a pivotal role in engineering new MS technologies aimed at enhancing GC-MS technology. Upon relocating to the United States in 2022, Yoshiro shifted his focus to application development, with a particular emphasis on the environmental market. Leveraging the latest advancements in GC-MS technology, he has been driving innovations that address critical environmental challenges.

    View all posts
  • Ramkumar Dhandapani

    Dr. Ramkumar Dhandapani is a seasoned analytical chemist with over 23 years of experience in the chromatography industry and a Ph.D. in analytical chemistry. During his career, he has specialized in method development, validation, and the troubleshooting of chromatography methods. He has developed numerous regulatory-compliant methods across diverse sectors, including environmental analysis, food quality and safety, pharmaceutical, fuels, and chemical industries. Currently, Dr. Dhandapani is the Director of Product Management at Restek, he is keen on innovation in chromatography and scaling breakthrough innovations to market as commercial products.

    View all posts
  • Erica Pack, PhD

    Erica is an interdisciplinary GC applications and technologies scientist at Restek. She obtained her bachelor's degree in forensic biology from The Pennsylvania State University, and her doctorate from Virginia Tech in plant pathology, physiology, and weed science. Since joining Restek in 2021, she has worked with a wide variety of GC columns, including fused silica, MXT, PLOT, and packed columns as well as accessories, such as liners, valves, and methanizers.

    View all posts
EVAN5254